STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC108510807Putative disease resistance RPP13-like protein 1; Belongs to the disease resistance NB-LRR family. (666 aa)    
Predicted Functional Partners:
LOC103701505
LOW QUALITY PROTEIN: plant intracellular Ras-group-related LRR protein 1-like.
  
     0.489
LOC103716268
LRR receptor-like serine/threonine-protein kinase RCH1.
  
     0.479
LOC103700059
Receptor-like protein 52.
  
 
   0.476
LOC103709252
Plant intracellular Ras-group-related LRR protein 7.
  
     0.476
LOC103713420
Receptor-like protein 52.
  
     0.474
LOC113460956
Receptor-like protein EIX2.
  
     0.469
LOC108511686
LRR receptor-like serine/threonine-protein kinase EFR.
  
     0.466
LOC103715442
MDIS1-interacting receptor like kinase 2-like.
  
     0.466
LOC103699602
Receptor-like protein 43.
  
     0.462
LOC103700035
Receptor kinase-like protein Xa21.
  
     0.462
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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