STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103698649LOW QUALITY PROTEIN: protein JINGUBANG-like. (513 aa)    
Predicted Functional Partners:
LOC103713882
Tetratricopeptide repeat protein SKI3 isoform X1.
    
 0.806
LOC103696837
Protein CDC73 homolog.
    
 0.743
LOC103696581
Protein CTR9 homolog isoform X1.
    
 0.679
LOC103713039
DExH-box ATP-dependent RNA helicase DExH15 chloroplastic.
    
 0.666
LOC103713726
DExH-box ATP-dependent RNA helicase DExH11 isoform X1.
    
 0.666
LOC103706899
Denticleless protein homolog isoform X1.
  
 
 0.573
LOC103710734
Protein PAF1 homolog.
   
 0.572
LOC103712257
Protein PAF1 homolog.
   
 0.572
LOC103706955
Exosome complex component CSL4 isoform X1.
     
 0.536
LOC103705019
Protein LEO1 homolog.
    
 0.521
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.