LOC103697460 protein (Phoenix dactylifera) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

LOC103697460

Uncharacterized protein LOC103697460 isoform X1. (235 aa)

Predicted Functional Partners:

LOC103714943

0.763

LOC103710110

0.710

LOC103706807

0.684

LOC103724048

0.678

LOC103698693

0.635

LOC103720080

0.635

LOC103704502

0.594

LOC103713346

0.594

LOC103699115

0.583

LOC103723766

0.570

Your Current Organism:

Phoenix dactylifera

NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103697460	LOC103698693	A0A3Q0HU73	A0A2H3X655	Uncharacterized protein LOC103697460 isoform X1.	Uncharacterized protein LOC103720080 isoform X3.	0.635
LOC103697460	LOC103699115	A0A3Q0HU73	A0A2H3ZK46	Uncharacterized protein LOC103697460 isoform X1.	DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	0.583
LOC103697460	LOC103704502	A0A3Q0HU73	A0A2H3XN03	Uncharacterized protein LOC103697460 isoform X1.	Serine/threonine-protein phosphatase 5-like.	0.594
LOC103697460	LOC103706807	A0A3Q0HU73	A0A2H3XV87	Uncharacterized protein LOC103697460 isoform X1.	Cleavage and polyadenylation specificity factor subunit 3-II.	0.684
LOC103697460	LOC103710110	A0A3Q0HU73	A0A2H3Y6K9	Uncharacterized protein LOC103697460 isoform X1.	Protein SIEL isoform X1.	0.710
LOC103697460	LOC103713346	A0A3Q0HU73	A0A2H3YGI0	Uncharacterized protein LOC103697460 isoform X1.	STIP1 homology and U box-containing protein 1-like isoform X1.	0.594
LOC103697460	LOC103714943	A0A3Q0HU73	A0A2H3YLQ8	Uncharacterized protein LOC103697460 isoform X1.	Integrator complex subunit 3.	0.763
LOC103697460	LOC103720080	A0A3Q0HU73	A0A2H3Z399	Uncharacterized protein LOC103697460 isoform X1.	Uncharacterized protein LOC103720080 isoform X1.	0.635
LOC103697460	LOC103723766	A0A3Q0HU73	A0A2H3ZFH2	Uncharacterized protein LOC103697460 isoform X1.	DNA-directed RNA polymerase II subunit 4 isoform X1.	0.570
LOC103697460	LOC103724048	A0A3Q0HU73	A0A2H3ZH32	Uncharacterized protein LOC103697460 isoform X1.	Integrator complex subunit 9 homolog isoform X1.	0.678
LOC103698693	LOC103697460	A0A2H3X655	A0A3Q0HU73	Uncharacterized protein LOC103720080 isoform X3.	Uncharacterized protein LOC103697460 isoform X1.	0.635
LOC103698693	LOC103699115	A0A2H3X655	A0A2H3ZK46	Uncharacterized protein LOC103720080 isoform X3.	DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	0.888
LOC103698693	LOC103706807	A0A2H3X655	A0A2H3XV87	Uncharacterized protein LOC103720080 isoform X3.	Cleavage and polyadenylation specificity factor subunit 3-II.	0.969
LOC103698693	LOC103710110	A0A2H3X655	A0A2H3Y6K9	Uncharacterized protein LOC103720080 isoform X3.	Protein SIEL isoform X1.	0.971
LOC103698693	LOC103714943	A0A2H3X655	A0A2H3YLQ8	Uncharacterized protein LOC103720080 isoform X3.	Integrator complex subunit 3.	0.982
LOC103698693	LOC103723766	A0A2H3X655	A0A2H3ZFH2	Uncharacterized protein LOC103720080 isoform X3.	DNA-directed RNA polymerase II subunit 4 isoform X1.	0.883
LOC103698693	LOC103724048	A0A2H3X655	A0A2H3ZH32	Uncharacterized protein LOC103720080 isoform X3.	Integrator complex subunit 9 homolog isoform X1.	0.948
LOC103699115	LOC103697460	A0A2H3ZK46	A0A3Q0HU73	DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein LOC103697460 isoform X1.	0.583
LOC103699115	LOC103698693	A0A2H3ZK46	A0A2H3X655	DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Uncharacterized protein LOC103720080 isoform X3.	0.888
LOC103699115	LOC103704502	A0A2H3ZK46	A0A2H3XN03	DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	Serine/threonine-protein phosphatase 5-like.	0.573