STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103697941High mobility group B protein 15-like isoform X1. (495 aa)    
Predicted Functional Partners:
LOC103722428
Actin-related protein 4; Belongs to the actin family.
   
 0.974
LOC103696185
Chromatin structure-remodeling complex protein SYD-like.
   
 0.909
LOC103717336
Chromatin structure-remodeling complex protein SYD-like isoform X1.
   
 0.909
LOC103723358
Chromatin structure-remodeling complex protein SYD-like.
   
 0.909
LOC103697124
Uncharacterized protein LOC103697124 isoform X1.
   
 
 0.891
LOC103717926
Uncharacterized protein LOC103717926 isoform X1.
   
 
 0.891
LOC103695973
Chromatin structure-remodeling complex protein BSH isoform X1.
   
 
 0.891
LOC103695897
SWI/SNF complex component SNF12 homolog.
   
 
 0.890
LOC103706512
SWI/SNF complex component SNF12 homolog.
   
 
 0.890
LOC103710637
Histone deacetylase complex subunit SAP18.
   
 
 0.861
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.