STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103698518Coiled-coil domain-containing protein 22 homolog. (569 aa)    
Predicted Functional Partners:
LOC103717445
Coiled-coil domain-containing protein 93 isoform X1.
  
 
 
 0.948
LOC103700360
UPF0505 protein C16orf62 homolog isoform X1.
  
 
 
 0.911
LOC103701861
Down syndrome critical region protein 3 homolog isoform X1.
  
 
 0.904
LOC103718573
Interferon-related developmental regulator 1.
    
 0.840
LOC103723213
Interferon-related developmental regulator 2-like isoform X1.
    
 0.840
LOC103703387
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.704
LOC103717757
Vacuolar protein sorting-associated protein 29; Belongs to the VPS29 family.
    
 
 0.704
LOC103712331
NEDD8-activating enzyme E1 catalytic subunit.
   
 
  0.689
LOC103711146
COP9 signalosome complex subunit 1-like.
   
 
  0.675
LOC103714145
COP9 signalosome complex subunit 1 isoform X1.
   
 
  0.675
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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