STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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Textmining
[Homology]
Score
LOC10370145226S proteasome non-ATPase regulatory subunit 1 homolog; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (1015 aa)    
Predicted Functional Partners:
LOC103708657
26S proteasome non-ATPase regulatory subunit 11 homolog.
   
 0.991
LOC103697396
26S proteasome non-ATPase regulatory subunit 6.
   
 0.984
LOC103719270
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
0.984
LOC103701646
26S proteasome non-ATPase regulatory subunit 2 homolog; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
0.984
LOC103712963
26S proteasome non-ATPase regulatory subunit 12 homolog A isoform X1.
   
 0.981
LOC103719444
26S proteasome non-ATPase regulatory subunit 12 homolog A-like isoform X1.
   
 0.981
LOC103710835
Proteasome subunit alpha type; The proteasome is a multicatalytic proteinase complex which is characterized by its ability to cleave peptides with Arg, Phe, Tyr, Leu, and Glu adjacent to the leaving group at neutral or slightly basic pH; Belongs to the peptidase T1A family.
   
 0.977
LOC103704051
26S proteasome non-ATPase regulatory subunit 7 homolog A.
   
 0.976
LOC103715057
26S proteasome non-ATPase regulatory subunit 7 homolog A-like.
   
 0.976
LOC103707096
26S proteasome regulatory subunit 4 homolog A isoform X1; Belongs to the AAA ATPase family.
   
 0.974
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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