STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103705217psbP domain-containing protein 3, chloroplastic isoform X1. (253 aa)    
Predicted Functional Partners:
LOC103715210
30S ribosomal protein S1, chloroplastic.
   
  
 0.579
LOC103706272
psbP domain-containing protein 6, chloroplastic.
   
  
 0.569
LOC103720913
psbP domain-containing protein 5, chloroplastic isoform X1.
   
  
 0.540
LOC103712340
Uncharacterized protein LOC103712340 isoform X1.
   
  
 0.536
LOC103703464
Uncharacterized protein LOC103703464.
      
 0.517
LOC103703802
Cysteine-rich receptor-like protein kinase 3.
      
 0.501
LOC103723625
NAD(P)H-quinone oxidoreductase subunit L, chloroplastic.
   
  
 0.485
LOC103722490
LOW QUALITY PROTEIN: photosystem II stability/assembly factor HCF136, chloroplastic-like.
   
  
 0.448
LOC103696585
Polyadenylate-binding protein-interacting protein 11-like isoform X1.
      
 0.432
LOC103697683
Polyadenylate-binding protein-interacting protein 12-like isoform X1.
      
 0.432
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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