Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LOC103696931 | LOC103710540 | A0A2H3X1G2 | A0A2H3Y7X8 | High affinity nitrate transporter 2.4-like. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.969 |
LOC103696931 | LOC103713555 | A0A2H3X1G2 | A0A3Q0I5L5 | High affinity nitrate transporter 2.4-like. | High-affinity nitrate transporter-activating protein 2.1-like. | 0.552 |
LOC103710540 | LOC103696931 | A0A2H3Y7X8 | A0A2H3X1G2 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | High affinity nitrate transporter 2.4-like. | 0.969 |
LOC103710540 | LOC103713555 | A0A2H3Y7X8 | A0A3Q0I5L5 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | High-affinity nitrate transporter-activating protein 2.1-like. | 0.424 |
LOC103713555 | LOC103696931 | A0A3Q0I5L5 | A0A2H3X1G2 | High-affinity nitrate transporter-activating protein 2.1-like. | High affinity nitrate transporter 2.4-like. | 0.552 |
LOC103713555 | LOC103710540 | A0A3Q0I5L5 | A0A2H3Y7X8 | High-affinity nitrate transporter-activating protein 2.1-like. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.424 |
LOC103713555 | LOC103719047 | A0A3Q0I5L5 | A0A2H3YZQ6 | High-affinity nitrate transporter-activating protein 2.1-like. | Tonoplast dicarboxylate transporter-like isoform X1. | 0.406 |
LOC103719047 | LOC103713555 | A0A2H3YZQ6 | A0A3Q0I5L5 | Tonoplast dicarboxylate transporter-like isoform X1. | High-affinity nitrate transporter-activating protein 2.1-like. | 0.406 |