STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103708528LOW QUALITY PROTEIN: uncharacterized protein LOC103708528. (807 aa)    
Predicted Functional Partners:
LOC103715470
Uncharacterized protein LOC103715470.
    
   0.650
LOC103723997
DNA mismatch repair protein MLH3 isoform X1.
 
  
 0.615
LOC103719170
DNA polymerase; DNA polymerase that functions in several pathways of DNA repair. Involved in base excision repair (BER) responsible for repair of lesions that give rise to abasic (AP) sites in DNA. Also contributes to DNA double-strand break repair by non-homologous end joining and homologous recombination. Has both template-dependent and template- independent (terminal transferase) DNA polymerase activities. Has also a 5'-deoxyribose-5-phosphate lyase (dRP lyase) activity.
  
  
 0.601
LOC103715056
Imidazole glycerol phosphate synthase hisHF; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The glutaminase domain produces the ammonia necessary for the cyclase domain to produce IGP and AICAR from PRFAR. The ammonia is channeled to the active site of the cyclase domain. In the C-terminal section; belongs to the HisA/HisF family.
     
 0.578
LOC103715167
Glutamine-dependent NAD(+) synthetase; In the C-terminal section; belongs to the NAD synthetase family.
     
 0.576
LOC103715400
Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs.
     
 0.573
LOC103718613
LOW QUALITY PROTEIN: DNA mismatch repair protein PMS1.
 
  
 0.565
LOC103711055
DNA mismatch repair protein MLH1 isoform X1.
 
  
 0.563
LOC103705022
L-2-hydroxyglutarate dehydrogenase, mitochondrial isoform X1.
     
 0.547
LOC103698850
50S ribosomal protein L9, chloroplastic.
    
   0.540
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.