STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103711568Arginine-glutamic acid dipeptide repeats protein-like. (905 aa)    
Predicted Functional Partners:
LOC103704201
Aromatic aminotransferase ISS1 isoform X1.
     
 0.910
LOC103720842
Aromatic aminotransferase ISS1-like isoform X1.
     
 0.910
LOC103722148
Tryptophan decarboxylase 2 isoform X1.
     
 0.908
LOC103709887
Tryptophan decarboxylase 1-like.
     
 0.904
LOC103723655
tyrosine/DOPA decarboxylase 1-like.
     
 0.903
LOC103703781
Uncharacterized protein LOC103703781.
  
  
 
0.900
LOC108511861
Tryptophan aminotransferase-related protein 2-like.
     
 
0.900
LOC103698479
Tryptophan synthase alpha chain, chloroplastic-like; Belongs to the TrpA family.
     
  0.800
LOC103703474
Tryptophan synthase.
     
  0.800
LOC103706010
Tryptophan synthase alpha chain, chloroplastic-like; Belongs to the TrpA family.
     
  0.800
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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