STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103718416Cellulose synthase-like protein D4 isoform X1; Belongs to the glycosyltransferase 2 family. (1147 aa)    
Predicted Functional Partners:
LOC103698595
Dihydroxy-acid dehydratase, chloroplastic.
   
 0.689
LOC103695952
UDP-glucose 6-dehydrogenase.
  
 
 0.605
LOC103704461
UDP-glucose 6-dehydrogenase.
  
 
 0.605
LOC103709251
UDP-glucose 6-dehydrogenase.
  
 
 0.605
LOC103718180
UDP-glucose 6-dehydrogenase.
  
 
 0.605
LOC103716575
Ankyrin-1.
  
 0.588
LOC103715203
Acetolactate synthase small subunit 2, chloroplastic.
   
 0.563
LOC103721283
Probable xyloglucan glycosyltransferase 6 isoform X1.
   
 
 0.546
LOC103696375
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.515
LOC103716578
Exocyst complex component; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
      
 0.515
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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