STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103714333Serine/threonine-protein kinase Aurora-2 isoform X1; Belongs to the protein kinase superfamily. (333 aa)    
Predicted Functional Partners:
LOC103723308
Mitotic spindle checkpoint protein MAD2.
   
 0.858
LOC103698200
Putative E3 ubiquitin-protein ligase RF298.
   
 0.812
LOC103706383
LOW QUALITY PROTEIN: MND1-interacting protein 1-like.
   
 0.812
LOC103710969
Putative E3 ubiquitin-protein ligase RF298.
   
 0.812
LOC103714071
LOW QUALITY PROTEIN: MND1-interacting protein 1-like.
   
 0.812
LOC103716924
Sacsin.
   
 0.812
LOC103716183
Putative E3 ubiquitin-protein ligase RF298.
   
 0.812
LOC103696471
LOW QUALITY PROTEIN: separase.
   
 
 0.788
LOC103705612
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.780
LOC103715166
ATP synthase subunit beta; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
 0.780
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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