STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103718816KH domain-containing protein HEN4-like isoform X1. (558 aa)    
Predicted Functional Partners:
LOC103721496
Nuclear cap-binding protein subunit 2.
    
 0.664
LOC103699115
DNA-directed RNA polymerases II, IV and V subunit 8B-like isoform X1; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 
  0.561
LOC103707294
Nuclear cap-binding protein subunit 1-like isoform X1.
    
 0.529
LOC103722124
Nuclear cap-binding protein subunit 1-like.
    
 0.529
LOC103712849
DNA-directed RNA polymerases I and III subunit rpac1.
   
 
  0.514
LOC103723766
DNA-directed RNA polymerase II subunit 4 isoform X1.
    
  0.513
LOC103711492
pre-mRNA-processing-splicing factor 8A.
   
   0.511
LOC103701345
DNA-directed RNA polymerase subunit 10-like protein.
   
  0.463
LOC103719943
DNA-directed RNA polymerase subunit 10-like protein.
   
  0.463
LOC103714142
DNA-directed RNA polymerases II, IV and V subunit 6A-like.
   
 
  0.462
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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