STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103719176NLR family CARD domain-containing protein 3 isoform X1. (354 aa)    
Predicted Functional Partners:
LOC113462351
Uncharacterized protein LOC113462351.
 
    
0.896
LOC103720267
Uncharacterized protein LOC103720267.
 
    
0.709
LOC103711604
Angio-associated migratory cell protein isoform X1.
     
 0.646
LOC103697899
ubiquitin-60S ribosomal protein L40.
    
  0.583
LOC103702516
Uncharacterized protein LOC103702516 isoform X1; Belongs to the peptidase S9B family.
    
   0.539
LOC103719615
Uncharacterized protein LOC103719615; Belongs to the peptidase S9B family.
    
   0.539
LOC103709637
ubiquitin-40S ribosomal protein S27a-like.
    
  0.519
LOC103701036
ubiquitin-40S ribosomal protein S27a.
    
  0.519
LOC103696584
ubiquitin-40S ribosomal protein S27a-like isoform X1.
    
  0.519
LOC103712935
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
 0.500
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.