LOC113463338 protein (Phoenix dactylifera) - STRING interaction network

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Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

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co-expression

protein homology

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[Homology]

Score

LOC113463338

LOW QUALITY PROTEIN: myb-related protein 306-like. (214 aa)

Predicted Functional Partners:

LOC103713740

0.523

LOC103700094

0.493

Your Current Organism:

Phoenix dactylifera

NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC103700094	LOC103713740	A0A2H3X960	A0A3Q0I5P7	Transcription factor MYB1-like.	Transcription factor MYB52-like.	0.514
LOC103700094	LOC113463338	A0A2H3X960	A0A3Q0IFA6	Transcription factor MYB1-like.	LOW QUALITY PROTEIN: myb-related protein 306-like.	0.493
LOC103713740	LOC103700094	A0A3Q0I5P7	A0A2H3X960	Transcription factor MYB52-like.	Transcription factor MYB1-like.	0.514
LOC103713740	LOC113463338	A0A3Q0I5P7	A0A3Q0IFA6	Transcription factor MYB52-like.	LOW QUALITY PROTEIN: myb-related protein 306-like.	0.523
LOC113463338	LOC103700094	A0A3Q0IFA6	A0A2H3X960	LOW QUALITY PROTEIN: myb-related protein 306-like.	Transcription factor MYB1-like.	0.493
LOC113463338	LOC103713740	A0A3Q0IFA6	A0A3Q0I5P7	LOW QUALITY PROTEIN: myb-related protein 306-like.	Transcription factor MYB52-like.	0.523

Network Stats

number of nodes:

11

number of edges:

42

average node degree:

7.64

avg. local clustering coefficient:

0.901

expected number of edges:

13

PPI enrichment p-value:

1.03e-10

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
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Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:3710

Phosphopantetheine, and Fatty acid metabolism

4 of 22

2.07

2.08

6.77e-05

CL:3738

Amino acid adenylation domain, and Polyketide synthase, dehydratase domain

2 of 5

2.41

1.1

0.0095

CL:4313

Mixed, incl. Rhodanese Homology Domain, and MraW methylase family

2 of 6

2.33

1.06

0.0111

CL:10417

Type 1 protein exporter, and Response to radiation

2 of 7

2.26

1.02

0.0127

CL:3712

Thiolase-like, and Phosphopantetheine attachment site

2 of 10

2.11

0.9

0.0209

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0596

Phosphopantetheine

4 of 11

2.37

3.11

8.94e-07

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF00550

Phosphopantetheine attachment site

3 of 10

2.28

1.69

0.00065

PF16197

Ketoacyl-synthetase C-terminal extension

2 of 2

2.81

1.25

0.0054

PF00668

Condensation domain

2 of 3

2.63

1.22

0.0060

PF02801

Beta-ketoacyl synthase, C-terminal domain

2 of 5

2.41

1.1

0.0094

PF00109

Beta-ketoacyl synthase, N-terminal domain

2 of 6

2.33

1.08

0.0100

(more ...)

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR036736

ACP-like superfamily

4 of 11

2.37

2.64

8.64e-06

IPR009081

Phosphopantetheine binding ACP domain

4 of 11

2.37

2.64

8.64e-06

IPR020806

Polyketide synthase, phosphopantetheine-binding domain

3 of 8

2.38

1.87

0.00031

IPR042104

Polyketide synthase, dehydratase domain superfamily

2 of 2

2.81

1.2

0.0066

IPR032821

Polyketide synthase, C-terminal extension

2 of 2

2.81

1.2

0.0066

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00822

This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.

2 of 2

2.81

1.46

0.0022

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