STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103721148RNA-binding protein 39-like. (601 aa)    
Predicted Functional Partners:
LOC103715760
Cell division cycle 5-like protein.
   
 
 0.780
LOC103719325
Cell division cycle 5-like protein.
   
 
 0.780
LOC103701668
RNA-binding protein 25 isoform X1.
   
0.717
LOC103710060
RNA-binding protein 25-like isoform X1.
   
0.717
LOC103720448
Uncharacterized protein LOC103720448 isoform X1.
   
 0.706
LOC103714107
Serrate RNA effector molecule.
   
 0.689
LOC103715678
Serine/arginine repetitive matrix protein 1 isoform X1.
   
 0.680
LOC103716751
Serine/arginine repetitive matrix protein 1-like isoform X1.
   
 0.680
LOC103696709
Serine/arginine repetitive matrix protein 2.
   
 0.677
LOC103719213
Suppressor of mec-8 and unc-52 protein homolog 2.
    
  0.645
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.