STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC1037183356-phosphogluconate dehydrogenase, decarboxylating; Belongs to the 6-phosphogluconate dehydrogenase family. (524 aa)    
Predicted Functional Partners:
LOC103700230
Ribulose-phosphate 3-epimerase, chloroplastic isoform X1.
   
 0.985
LOC103710577
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
   
 0.985
LOC103705039
Gluconokinase; Belongs to the gluconokinase GntK/GntV family.
    
 0.950
LOC103721353
Probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1.
   
 
 0.882
LOC103696103
Probable 6-phosphogluconolactonase; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.
  
 
 0.873
LOC103697284
Probable 6-phosphogluconolactonase; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.
  
 
 0.873
LOC103704206
Probable 6-phosphogluconolactonase; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.
  
 
 0.873
LOC103697129
Probable 6-phosphogluconolactonase 4, chloroplastic.
  
 
 0.870
LOC103722058
Probable 6-phosphogluconolactonase; Belongs to the glucosamine/galactosamine-6-phosphate isomerase family. 6-phosphogluconolactonase subfamily.
  
 
 0.870
LOC103723374
Probable 6-phosphogluconolactonase 4, chloroplastic.
  
 
 0.870
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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