STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103722045Protein MULTIPOLAR SPINDLE 1 isoform X1. (406 aa)    
Predicted Functional Partners:
LOC113460951
LOW QUALITY PROTEIN: protein PRD1.
      
 0.577
LOC103710698
LOW QUALITY PROTEIN: meiotic recombination protein SPO11-2.
      
 0.571
LOC103695982
Protein PAIR1.
      
 0.571
LOC103697232
Meiotic recombination protein SPO11-1-like.
      
 0.571
LOC103708853
Uncharacterized protein LOC103708853.
      
 0.569
LOC103702062
Type 2 DNA topoisomerase 6 subunit B-like.
      
 0.569
LOC103723722
WD repeat-containing protein VIP3.
      
 0.516
LOC103696360
Protein AMEIOTIC 1 homolog.
      
 0.516
LOC103724315
RNA polymerase II C-terminal domain phosphatase-like; This promotes the activity of RNA polymerase II.
      
 0.514
LOC103716372
Meiotic recombination protein DMC1 homolog; Belongs to the RecA family.
      
 0.514
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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