STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC113463576Ferredoxin--nitrite reductase, chloroplastic-like. (165 aa)    
Predicted Functional Partners:
LOC103699657
5'-adenylylsulfate reductase 1, chloroplastic-like.
  
 0.936
LOC103719146
5'-adenylylsulfate reductase 3, chloroplastic-like.
  
 0.936
LOC103707194
5'-adenylylsulfate reductase 3, chloroplastic-like.
  
 0.936
LOC103716103
5'-adenylylsulfate reductase 3, chloroplastic-like isoform X1.
  
 0.910
LOC103710540
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
   
 
 0.888
LOC103704527
Uncharacterized protein LOC103704527; Belongs to the precorrin methyltransferase family.
  
 
 0.882
LOC103713245
Uncharacterized protein LOC103713245; Belongs to the precorrin methyltransferase family.
  
 
 0.882
LOC103698688
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 
 0.880
LOC103705309
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 
 0.880
LOC103716471
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
  
 
 0.880
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.