STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC103722450Flowering time control protein FY-like isoform X1. (691 aa)    
Predicted Functional Partners:
LOC103705537
Cleavage and polyadenylation specificity factor subunit 2.
    
 0.991
LOC103695637
Zinc finger CCCH domain-containing protein 45-like isoform X2.
   
 0.979
LOC103713836
Zinc finger CCCH domain-containing protein 45-like.
   
 0.979
LOC103701243
RNA polymerase II subunit A C-terminal domain phosphatase SSU72.
    
 0.978
LOC103703253
RNA polymerase II subunit A C-terminal domain phosphatase SSU72-like.
    
 0.978
LOC103708691
Cleavage and polyadenylation specificity factor subunit 1 isoform X1.
    
 0.977
LOC103708156
Protein ANTHESIS POMOTING FACTOR 1 isoform X1.
  
 0.975
LOC103712231
Protein arginine N-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily.
   
 0.974
LOC103719890
Protein ANTHESIS POMOTING FACTOR 1 isoform X1.
  
0.971
LOC103718100
Cleavage stimulation factor subunit 77 isoform X1.
   
 0.968
Your Current Organism:
Phoenix dactylifera
NCBI taxonomy Id: 42345
Other names: P. dactylifera, Phoenix dactylifera L., date palm
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