Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| LOC103703041 | LOC103712048 | A0A3Q0HZF8 | A0A2H3YC84 | Uncharacterized protein LOC103703041 isoform X1. | Uncharacterized protein LOC103712048. | 0.936 |
| LOC103703041 | rpl23 | A0A3Q0HZF8 | B6E646 | Uncharacterized protein LOC103703041 isoform X1. | 50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. | 0.776 |
| LOC103707838 | LOC103712048 | A0A2H3XYP9 | A0A2H3YC84 | KAT8 regulatory NSL complex subunit 3 isoform X1. | Uncharacterized protein LOC103712048. | 0.936 |
| LOC103707838 | rpl23 | A0A2H3XYP9 | B6E646 | KAT8 regulatory NSL complex subunit 3 isoform X1. | 50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. | 0.776 |
| LOC103711255 | rpl23 | A0A2H3Y9N3 | B6E646 | Uncharacterized protein LOC103711255. | 50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. | 0.900 |
| LOC103711255 | rps19 | A0A2H3Y9N3 | D4PBF2 | Uncharacterized protein LOC103711255. | 30S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.914 |
| LOC103711255 | rps8 | A0A2H3Y9N3 | D4PBE7 | Uncharacterized protein LOC103711255. | 30S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit. | 0.793 |
| LOC103712048 | LOC103703041 | A0A2H3YC84 | A0A3Q0HZF8 | Uncharacterized protein LOC103712048. | Uncharacterized protein LOC103703041 isoform X1. | 0.936 |
| LOC103712048 | LOC103707838 | A0A2H3YC84 | A0A2H3XYP9 | Uncharacterized protein LOC103712048. | KAT8 regulatory NSL complex subunit 3 isoform X1. | 0.936 |
| LOC103712048 | rpl23 | A0A2H3YC84 | B6E646 | Uncharacterized protein LOC103712048. | 50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. | 0.864 |
| atpF | clpP | C5H8Z0 | D4PBD6 | ATP synthase subunit b, chloroplastic; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 0.899 |
| atpF | psbE | C5H8Z0 | D4PBC8 | ATP synthase subunit b, chloroplastic; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.848 |
| atpF | rpl23 | C5H8Z0 | B6E646 | ATP synthase subunit b, chloroplastic; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). | 50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. | 0.672 |
| atpF | rpl33 | C5H8Z0 | D4PBD2 | ATP synthase subunit b, chloroplastic; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). | 50S ribosomal protein L33, chloroplastic. | 0.658 |
| atpF | rps19 | C5H8Z0 | D4PBF2 | ATP synthase subunit b, chloroplastic; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). | 30S ribosomal protein S19, chloroplastic; Protein S19 forms a complex with S13 that binds strongly to the 16S ribosomal RNA. | 0.707 |
| atpF | rps8 | C5H8Z0 | D4PBE7 | ATP synthase subunit b, chloroplastic; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). | 30S ribosomal protein S8, chloroplastic; One of the primary rRNA binding proteins, it binds directly to 16S rRNA central domain where it helps coordinate assembly of the platform of the 30S subunit. | 0.934 |
| clpP | atpF | D4PBD6 | C5H8Z0 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | ATP synthase subunit b, chloroplastic; Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0). | 0.899 |
| clpP | psbE | D4PBD6 | D4PBC8 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | Cytochrome b559 subunit alpha; This b-type cytochrome is tightly associated with the reaction center of photosystem II (PSII). PSII is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. Belongs to the PsbE/PsbF family. | 0.743 |
| clpP | rpl23 | D4PBD6 | B6E646 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 50S ribosomal protein L23, chloroplastic; Binds to 23S rRNA. | 0.688 |
| clpP | rpl33 | D4PBD6 | D4PBD2 | ATP-dependent Clp protease proteolytic subunit; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. | 50S ribosomal protein L33, chloroplastic. | 0.633 |
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