STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN83589.1Proteic killer suppression protein. (92 aa)    
Predicted Functional Partners:
SEN83626.1
Addiction module antidote protein, HigA family.
 
 
 0.993
SEO14329.1
Addiction module antidote protein, HigA family.
 
 
 
 0.900
SEO60427.1
Addiction module antidote protein, HigA family.
 
 
 
 0.897
SEN83550.1
Phage integrase family protein.
       0.607
SEN83646.1
Hypothetical protein.
       0.509
SEN83734.1
Hypothetical protein.
 
     0.476
SEP17564.1
mRNA interferase MazF.
  
     0.409
Your Current Organism:
Nitrosomonas oligotropha
NCBI taxonomy Id: 42354
Other names: N. oligotropha, Nitrosomonas oligotropha Koops et al. 2001, strain Nm 45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.