STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEN83734.1Hypothetical protein. (853 aa)    
Predicted Functional Partners:
SEN83695.1
Hypothetical protein.
       0.773
SEN83779.1
Hypothetical protein.
       0.773
SEN83815.1
Type I restriction enzyme M protein.
       0.648
SEN83864.1
Type I restriction enzyme, S subunit.
       0.648
SEO42588.1
Polysaccharide export outer membrane protein.
  
     0.624
SEO16014.1
Acyl carrier protein.
  
     0.533
SEN83646.1
Hypothetical protein.
       0.503
SEN83911.1
Antitoxin MazE.
       0.491
SEN83589.1
Proteic killer suppression protein.
 
     0.476
SEN75899.1
Hypothetical protein.
  
     0.446
Your Current Organism:
Nitrosomonas oligotropha
NCBI taxonomy Id: 42354
Other names: N. oligotropha, Nitrosomonas oligotropha Koops et al. 2001, strain Nm 45
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.