STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO17684.1Hypothetical protein. (327 aa)    
Predicted Functional Partners:
SEO17713.1
Multicopper oxidase.
   
  0.915
SEN74611.1
Multicopper oxidase.
    
  0.514
SEN93385.1
Dissimilatory nitrite reductase (NO-forming), copper type apoprotein; Belongs to the multicopper oxidase family.
    
  0.514
SEO74703.1
Suppressor of ftsI/bilirubin oxidase.
    
  0.514
SEO75061.1
Multicopper oxidase.
    
  0.514
SEO99966.1
CDP-4-dehydro-6-deoxyglucose reductase.
    
 
 0.482
SEN81810.1
Hypothetical protein.
    
   0.465
SEN81847.1
Hypothetical protein.
    
   0.465
SEN74647.1
DNA-binding beta-propeller fold protein YncE.
    
   0.465
SEO06923.1
PEP-CTERM protein-sorting domain-containing protein.
    
   0.465
Your Current Organism:
Nitrosomonas oligotropha
NCBI taxonomy Id: 42354
Other names: N. oligotropha, Nitrosomonas oligotropha Koops et al. 2001, strain Nm 45
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.