STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO38414.1Arsenical pump membrane protein. (196 aa)    
Predicted Functional Partners:
SEO38447.1
Arsenical pump membrane protein.
     0.994
SEO38479.1
Arsenate reductase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
     
 0.708
SEO38557.1
Transcriptional regulator, ArsR family.
  
  
 0.677
SEO38517.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
       0.671
SEO38384.1
Arsenical resistance operon trans-acting repressor ArsD.
     
 0.625
SEO38351.1
Arsenite efflux ATP-binding protein ArsA; Anion-transporting ATPase; Belongs to the arsA ATPase family.
     
 0.591
SEO76156.1
Acyl transferase domain-containing protein.
  
  
 0.426
Your Current Organism:
Nitrosomonas oligotropha
NCBI taxonomy Id: 42354
Other names: N. oligotropha, Nitrosomonas oligotropha Koops et al. 2001, strain Nm 45
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.