STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEO80992.1Type I restriction enzyme, S subunit. (422 aa)    
Predicted Functional Partners:
SEO81024.1
Type I restriction enzyme M protein.
 
   0.977
SEO80959.1
Type I restriction enzyme, R subunit; Subunit R is required for both nuclease and ATPase activities, but not for modification.
 
    0.962
SEP14218.1
Type I restriction enzyme, R subunit.
  
    0.838
SEO85831.1
Type I restriction enzyme M protein.
  
   0.803
SEO85883.1
Type I restriction enzyme M protein.
  
   0.796
SEP14199.1
Hypothetical protein.
 
     0.764
SEP03911.1
Type I restriction enzyme M protein.
 
   0.745
SEN83815.1
Type I restriction enzyme M protein.
  
   0.740
SEO95862.1
Type I restriction enzyme M protein.
  
   0.740
SEO00003.1
Type I restriction enzyme M protein.
  
   0.729
Your Current Organism:
Nitrosomonas oligotropha
NCBI taxonomy Id: 42354
Other names: N. oligotropha, Nitrosomonas oligotropha Koops et al. 2001, strain Nm 45
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