STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEP00889.1Type I restriction enzyme M protein. (580 aa)    
Predicted Functional Partners:
SEP00866.1
Type I restriction enzyme, S subunit.
   0.990
SEP00805.1
Type I restriction enzyme, R subunit.
 
   0.965
SEP00834.1
Protein of unknown function.
       0.717
SEN99888.1
Type I restriction enzyme, S subunit.
 
 
   0.690
SEP03930.1
Type I restriction enzyme, S subunit.
  
   0.660
SEO80992.1
Type I restriction enzyme, S subunit.
  
   0.652
SEP00777.1
AAA domain-containing protein.
  
  
 0.606
SEO94587.1
Type I restriction enzyme, S subunit.
  
   0.600
SEN83864.1
Type I restriction enzyme, S subunit.
   
   0.597
SEO85917.1
Type I restriction enzyme, S subunit.
 
 
   0.597
Your Current Organism:
Nitrosomonas oligotropha
NCBI taxonomy Id: 42354
Other names: N. oligotropha, Nitrosomonas oligotropha Koops et al. 2001, strain Nm 45
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.