STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_5X163860Uncharacterized protein. (86 aa)    
Predicted Functional Partners:
LSAT_4X29061
Uncharacterized protein.
      
 0.524
LSAT_7X29481
Uncharacterized protein.
      
 0.524
LSAT_5X97941
Uncharacterized protein.
  
   
 0.468
LSAT_8X55360
Uncharacterized protein.
  
     0.467
LSAT_9X4580
Uncharacterized protein.
  
     0.457
LSAT_5X187580
Uncharacterized protein.
  
     0.453
LSAT_4X182240
Uncharacterized protein.
  
     0.434
LSAT_6X111560
Uncharacterized protein.
  
     0.432
LSAT_6X38361
Uncharacterized protein; Belongs to the GDA1/CD39 NTPase family.
      
 0.426
LSAT_0X12381
ANK_REP_REGION domain-containing protein.
  
   
 0.424
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.