STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_8X55161Uncharacterized protein. (597 aa)    
Predicted Functional Partners:
LSAT_3X54081
Uncharacterized protein.
  
 
 0.959
LSAT_8X41580
Uncharacterized protein.
  
 
 0.954
LSAT_3X125660
DHQ_synthase domain-containing protein.
     
 0.926
LSAT_5X51160
Uncharacterized protein.
  
  
 
0.904
LSAT_4X140321
Uncharacterized protein.
  
  
 
0.902
LSAT_2X114381
Chorismate synthase.
  
 
 0.786
LSAT_2X88180
Chorismate mutase.
  
 
 0.715
LSAT_4X170081
Chorismate mutase.
  
 
 0.715
LSAT_9X89740
Nicotinamide-nucleotide adenylyltransferase.
  
  
 0.587
LSAT_4X137701
CTP_transf_like domain-containing protein.
  
  
 0.587
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.