STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_5X69941Uncharacterized protein. (219 aa)    
Predicted Functional Partners:
LSAT_2X128241
Uncharacterized protein.
  
     0.506
LSAT_8X105020
Methyltransf_2 domain-containing protein.
  
     0.492
LSAT_6X44101
Uncharacterized protein.
  
  
  0.484
LSAT_1X115380
Uncharacterized protein.
  
     0.465
LSAT_2X110841
Uncharacterized protein.
  
     0.448
LSAT_8X50121
Uncharacterized protein.
  
 
  0.446
LSAT_7X47940
Uncharacterized protein.
  
     0.440
LSAT_4X144561
Uncharacterized protein.
  
 
   0.436
LSAT_9X109600
BTB domain-containing protein.
  
     0.434
LSAT_9X33561
Uncharacterized protein.
  
    0.426
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.