STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_4X111701Rhodanese domain-containing protein. (392 aa)    
Predicted Functional Partners:
LSAT_8X30560
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
   
 0.979
LSAT_5X84680
MHD domain-containing protein.
   
 0.909
LSAT_3X6140
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
   
 0.862
LSAT_3X130621
Uncharacterized protein.
   
 0.862
LSAT_8X132701
Cnd1 domain-containing protein.
   
 0.862
LSAT_5X45441
Beta-adaptin-like protein; Subunit of clathrin-associated adaptor protein complex that plays a role in protein sorting in the late-Golgi/trans-Golgi network (TGN) and/or endosomes. The AP complexes mediate both the recruitment of clathrin to membranes and the recognition of sorting signals within the cytosolic tails of transmembrane cargo molecules.
   
 0.862
LSAT_6X86320
Uncharacterized protein.
   
 0.862
LSAT_6X5441
Adaptin_N domain-containing protein.
   
 0.862
LSAT_1X23361
Uncharacterized protein.
   
 0.858
LSAT_7X60580
ANF_receptor domain-containing protein.
   
 0.858
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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