STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_1X86180Uncharacterized protein. (326 aa)    
Predicted Functional Partners:
LSAT_3X2200
Uncharacterized protein.
  
     0.504
LSAT_8X29680
Uncharacterized protein.
  
     0.492
LSAT_6X43700
Uncharacterized protein.
  
     0.490
LSAT_3X37921
Uncharacterized protein.
  
     0.489
LSAT_3X49941
Uncharacterized protein.
  
     0.481
LSAT_4X42880
Uncharacterized protein.
  
     0.470
LSAT_9X31200
Uncharacterized protein.
  
     0.468
LSAT_9X51201
F-box domain-containing protein.
  
     0.454
LSAT_7X8561
Uncharacterized protein.
  
     0.451
LSAT_5X134520
Phytocyanin domain-containing protein.
  
     0.451
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.