STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_8X25520Uncharacterized protein. (523 aa)    
Predicted Functional Partners:
LSAT_8X15420
Adaptin_N domain-containing protein.
    
 0.954
LSAT_8X145181
AP-3 complex subunit delta; Part of the AP-3 complex, an adaptor-related complex which seems to be clathrin-associated. The complex is associated with the Golgi region as well as more peripheral structures. It facilitates the budding of vesicles from the Golgi membrane and may be directly involved in trafficking to the vacuole. It also function in maintaining the identity of lytic vacuoles and in regulating the transition between storage and lytic vacuoles.
    
 0.918
LSAT_2X11981
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 
 0.861
LSAT_1X96921
Glyco_hydr_116N domain-containing protein.
  
 
 0.655
LSAT_6X18541
Uncharacterized protein.
    
 0.596
LSAT_5X109620
Uncharacterized protein.
    
 0.596
LSAT_3X77260
Adaptin_N domain-containing protein.
    
 0.596
LSAT_6X17021
Uncharacterized protein.
    
 0.596
LSAT_2X30601
Uncharacterized protein.
    
 0.596
LSAT_5X175420
Adaptin_N domain-containing protein.
    
 0.596
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.