STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_5X149261Uncharacterized protein. (115 aa)    
Predicted Functional Partners:
LSAT_6X42781
4-hydroxyphenylpyruvate dioxygenase.
     
 0.912
LSAT_2X96721
4-hydroxyphenylpyruvate dioxygenase; Belongs to the 4HPPD family.
     
 0.912
LSAT_5X130860
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
  0.900
LSAT_5X130801
Uncharacterized protein; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
     
  0.900
LSAT_9X80761
Aminotran_1_2 domain-containing protein.
     
  0.900
LSAT_6X18741
Aspartate aminotransferase.
   
 
 0.664
LSAT_5X33281
Aspartate aminotransferase.
   
 
 0.664
LSAT_5X103541
Aspartate aminotransferase.
   
 
 0.664
LSAT_4X26660
Aspartate aminotransferase.
   
 
 0.664
LSAT_3X38780
Aminotran_1_2 domain-containing protein.
     
 0.662
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
Server load: low (18%) [HD]