STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_4X3060AAI domain-containing protein. (122 aa)    
Predicted Functional Partners:
LSAT_1X84360
PGG domain-containing protein.
  
  0.570
LSAT_9X7101
Uncharacterized protein.
  
 
   0.564
LSAT_1X107340
Uncharacterized protein.
  
    0.556
LSAT_8X62881
Prolamin_like domain-containing protein.
  
     0.538
LSAT_5X73661
F-box domain-containing protein.
  
     0.536
LSAT_9X117060
Uncharacterized protein.
  
    0.519
LSAT_5X4581
Uncharacterized protein.
  
     0.511
LSAT_7X9460
XH domain-containing protein.
  
   0.485
LSAT_9X124801
Uncharacterized protein.
  
 
 
 0.482
LSAT_7X62181
Uncharacterized protein.
  
 
  0.479
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.