STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_9X92380Uncharacterized protein. (72 aa)    
Predicted Functional Partners:
LSAT_6X70661
Uncharacterized protein.
  
 0.653
LSAT_7X29861
Uncharacterized protein.
  
   
 0.563
LSAT_3X64401
Uncharacterized protein.
  
  
 0.556
LSAT_1X72600
Non-specific lipid-transfer protein; Plant non-specific lipid-transfer proteins transfer phospholipids as well as galactolipids across membranes. May play a role in wax or cutin deposition in the cell walls of expanding epidermal cells and certain secretory tissues.
  
    0.544
LSAT_5X127341
Uncharacterized protein.
  
 
  0.543
LSAT_4X76100
Uncharacterized protein.
  
     0.542
LSAT_0X36860
Uncharacterized protein.
  
     0.541
LSAT_9X81421
Uncharacterized protein.
  
    0.541
LSAT_8X73161
Uncharacterized protein.
  
     0.540
LSAT_5X29201
Uncharacterized protein.
  
     0.540
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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