STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_7X59241Uncharacterized protein. (429 aa)    
Predicted Functional Partners:
LSAT_2X104520
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.972
LSAT_0X7801
Uncharacterized protein; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.972
LSAT_7X45660
Uncharacterized protein.
     
 0.971
LSAT_6X101381
Uncharacterized protein.
   
 
 0.968
LSAT_1X109880
Uncharacterized protein.
   
 
 0.968
LSAT_2X11881
Uncharacterized protein.
    
 0.918
LSAT_9X40221
Uncharacterized protein.
  
  
 
0.902
LSAT_5X78880
Rab-GAP TBC domain-containing protein.
  
  
 
0.901
LSAT_8X59061
Uncharacterized protein.
     
 0.729
LSAT_2X70740
Uncharacterized protein.
   
 
 0.697
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.