STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_3X48740Protein kinase domain-containing protein. (1067 aa)    
Predicted Functional Partners:
LSAT_7X37360
Uncharacterized protein.
    
  0.803
LSAT_2X73301
Starch synthase, chloroplastic/amyloplastic; Belongs to the glycosyltransferase 1 family. Bacterial/plant glycogen synthase subfamily.
     
  0.800
LSAT_7X51000
NAD(P)-bd_dom domain-containing protein.
     
  0.650
LSAT_5X87781
Epimerase domain-containing protein.
     
  0.650
LSAT_8X64581
NAD(P)-bd_dom domain-containing protein.
     
  0.650
LSAT_3X4041
NAD(P)-bd_dom domain-containing protein.
     
  0.650
LSAT_7X9700
Epimerase domain-containing protein.
     
  0.650
LSAT_3X132201
Epimerase domain-containing protein.
     
  0.650
LSAT_6X9861
NAD(P)-bd_dom domain-containing protein.
     
  0.650
LSAT_4X43401
Epimerase domain-containing protein.
     
  0.650
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.