STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_5X52080Uncharacterized protein. (1073 aa)    
Predicted Functional Partners:
LSAT_5X69540
DDT domain-containing protein.
    
 0.747
LSAT_4X134340
Uncharacterized protein.
    
 0.747
LSAT_2X45661
Uncharacterized protein.
    
 0.747
LSAT_2X59441
CBFD_NFYB_HMF domain-containing protein.
    
 0.744
LSAT_2X98340
RuvB-like helicase; Belongs to the RuvB family.
   
 0.678
LSAT_7X31901
DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.675
LSAT_8X137440
Uncharacterized protein.
  
0.671
LSAT_9X8160
Uncharacterized protein.
    
 0.665
LSAT_3X62981
Uncharacterized protein.
    
 0.665
LSAT_9X3120
SnAC domain-containing protein.
   
 0.626
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
Server load: low (18%) [HD]