STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_3X6320UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (183 aa)    
Predicted Functional Partners:
LSAT_0X5781
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.901
LSAT_4X35780
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
  
  
 
0.901
LSAT_9X81160
E2_bind domain-containing protein.
    
 0.841
LSAT_9X18560
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
    
 0.819
LSAT_8X102781
UBA_e1_C domain-containing protein; Belongs to the ubiquitin-activating E1 family.
    
 0.819
LSAT_5X173460
Uncharacterized protein.
    
 0.819
LSAT_4X90580
UBIQUITIN_CONJUGAT_2 domain-containing protein.
     
 0.775
LSAT_5X137661
Uncharacterized protein.
     
 0.775
LSAT_6X116240
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
0.773
LSAT_1X41000
UBIQUITIN_CONJUGAT_2 domain-containing protein.
   
 
0.773
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.