STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_4X63901SAM-dependent MTase TRM10-type domain-containing protein. (350 aa)    
Predicted Functional Partners:
LSAT_7X15980
SAM_MT_TRM5_TYW2 domain-containing protein.
   
  
 0.885
LSAT_8X56761
tRNA (guanine-N(7)-)-methyltransferase non-catalytic subunit; Required for the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. In the complex, it is required to stabilize and induce conformational changes of the catalytic subunit. Belongs to the WD repeat TRM82 family.
   
 
 0.838
LSAT_5X41801
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. TrmB family.
   
 
 0.801
LSAT_7X33441
Uncharacterized protein.
   
 
 0.801
LSAT_8X99960
Putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase; Methylates the 2'-O-ribose of nucleotides at positions 32 and 34 of the tRNA anticodon loop of substrate tRNAs.
   
  
 0.726
LSAT_1X5920
PseudoU_synth_1 domain-containing protein.
   
 
 0.723
LSAT_4X183181
tRNA (adenine(58)-N(1))-methyltransferase.
   
 
 0.719
LSAT_9X117961
UPF0020 domain-containing protein.
   
 
 0.710
LSAT_2X5561
PseudoU_synth_1 domain-containing protein.
   
 
 0.693
LSAT_9X14440
PseudoU_synth_1 domain-containing protein.
   
 
 0.693
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.