STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_4X170520Hexosyltransferase; Belongs to the glycosyltransferase 8 family. (598 aa)    
Predicted Functional Partners:
LSAT_5X137800
Pectinesterase; Acts in the modification of cell walls via demethylesterification of cell wall pectin. In the C-terminal section; belongs to the pectinesterase family.
      
 0.657
LSAT_4X66301
C2H2-type domain-containing protein.
      
 0.656
LSAT_5X184141
Uncharacterized protein.
      
 0.656
LSAT_1X77661
Uncharacterized protein.
      
 0.656
LSAT_2X10621
DAHP_synth_1 domain-containing protein.
      
 0.576
LSAT_2X88340
DAHP_synth_1 domain-containing protein.
      
 0.576
LSAT_8X143400
Uncharacterized protein.
      
 0.535
LSAT_6X36881
Uncharacterized protein; Belongs to the glycosyltransferase 2 family.
  
   
 0.501
LSAT_4X75340
Uncharacterized protein.
  
 
 
 0.476
LSAT_7X106520
Uncharacterized protein.
  
   
 0.454
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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