STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_3X355203-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (326 aa)    
Predicted Functional Partners:
LSAT_5X174621
PKS_AT domain-containing protein.
  
 0.964
LSAT_1X116480
Uncharacterized protein.
    
 0.963
LSAT_6X49841
Uncharacterized protein.
    
 0.963
LSAT_9X117420
FabA domain-containing protein.
  
 0.952
LSAT_6X36801
Uncharacterized protein.
  
 
0.927
LSAT_6X36821
Uncharacterized protein.
  
 
0.927
LSAT_6X109081
Uncharacterized protein.
  
 
 0.926
LSAT_3X2160
Uncharacterized protein.
  
 
 0.926
LSAT_6X1880
Uncharacterized protein.
  
 
 0.926
LSAT_3X35500
3-oxoacyl-[acyl-carrier-protein] reductase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
  
  
 
0.901
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.