STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_3X47800Uncharacterized protein; Belongs to the expansin family. (256 aa)    
Predicted Functional Partners:
LSAT_8X143381
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 0.578
LSAT_6X36921
Uncharacterized protein.
  
 
   0.524
LSAT_6X80241
Uncharacterized protein.
  
     0.516
LSAT_7X87000
Uncharacterized protein.
  
 
   0.510
LSAT_9X63200
Uncharacterized protein.
  
     0.510
LSAT_9X66700
Uncharacterized protein.
  
     0.508
LSAT_7X90061
Uncharacterized protein.
  
  
  0.499
LSAT_4X103040
Uncharacterized protein.
  
     0.494
LSAT_8X2121
Uncharacterized protein.
  
     0.490
LSAT_6X32400
Uncharacterized protein.
  
     0.489
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.