STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_8X116041Lipase_GDSL domain-containing protein; Belongs to the 'GDSL' lipolytic enzyme family. (376 aa)    
Predicted Functional Partners:
LSAT_3X119961
Uncharacterized protein.
  
   0.543
LSAT_2X43501
Uncharacterized protein.
  
 
   0.474
LSAT_3X62081
Uncharacterized protein.
  
     0.467
LSAT_6X34220
VQ domain-containing protein.
  
  
  0.463
LSAT_6X50800
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.456
LSAT_4X27161
Uncharacterized protein.
  
     0.455
LSAT_1X31681
Uncharacterized protein.
  
     0.455
LSAT_1X67920
Dirigent protein; Dirigent proteins impart stereoselectivity on the phenoxy radical-coupling reaction, yielding optically active lignans from two molecules of coniferyl alcohol in the biosynthesis of lignans, flavonolignans, and alkaloids and thus plays a central role in plant secondary metabolism.
  
     0.444
LSAT_8X75321
Uncharacterized protein.
  
     0.444
LSAT_5X58940
Uncharacterized protein.
  
     0.441
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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