STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_3X97940Alpha-1,4 glucan phosphorylase; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties. (950 aa)    
Predicted Functional Partners:
LSAT_2X67361
4-alpha-glucanotransferase.
 
 
 0.989
LSAT_8X83900
Uncharacterized protein.
  
 
 0.985
LSAT_9X52960
Uncharacterized protein.
  
 
 0.985
LSAT_4X13360
Uncharacterized protein; Belongs to the phosphohexose mutase family.
  
 
 0.982
LSAT_9X92360
Aamy domain-containing protein.
  
 
 0.977
LSAT_9X4440
Aamy domain-containing protein.
  
 
 0.976
LSAT_2X24180
Aamy domain-containing protein.
  
 
 0.975
LSAT_9X73901
Aamy domain-containing protein.
  
 
 0.975
LSAT_8X70320
Aamy domain-containing protein.
  
 
 0.972
LSAT_8X26220
Aamy domain-containing protein.
  
 
 0.972
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.