LSAT_7X47540 protein (Lactuca sativa) - STRING interaction network

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Predicted Interactions

gene neighborhood

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protein homology

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Score

LSAT_7X47540

Uncharacterized protein. (356 aa)

Predicted Functional Partners:

LSAT_6X13361

0.774

LSAT_9X111421

0.772

LSAT_2X67161

0.770

LSAT_6X116841

0.754

LSAT_1X106300

0.730

LSAT_1X108420

0.714

LSAT_1X108541

0.714

LSAT_7X114200

0.701

LSAT_1X85441

0.667

LSAT_9X38740

0.667

Your Current Organism:

Lactuca sativa

NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSAT_1X106300	LSAT_1X108420	A0A2J6LMB0	A0A2J6M3T0	RNA_pol_L_2 domain-containing protein.	Spt4 domain-containing protein.	0.987
LSAT_1X106300	LSAT_1X108541	A0A2J6LMB0	A0A2J6M452	RNA_pol_L_2 domain-containing protein.	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.	0.987
LSAT_1X106300	LSAT_1X85441	A0A2J6LMB0	A0A2J6LXN5	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	0.994
LSAT_1X106300	LSAT_2X67161	A0A2J6LMB0	A0A2J6KZG9	RNA_pol_L_2 domain-containing protein.	RPOL4c domain-containing protein.	0.998
LSAT_1X106300	LSAT_6X116841	A0A2J6LMB0	A0A2J6L9M9	RNA_pol_L_2 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
LSAT_1X106300	LSAT_6X13361	A0A2J6LMB0	A0A2J6LRX8	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.978
LSAT_1X106300	LSAT_7X114200	A0A2J6LMB0	A0A2J6LN13	RNA_pol_L_2 domain-containing protein.	RPOLD domain-containing protein.	0.989
LSAT_1X106300	LSAT_7X47540	A0A2J6LMB0	A0A2J6KJJ1	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein.	0.730
LSAT_1X106300	LSAT_9X111421	A0A2J6LMB0	A0A2J6LYA8	RNA_pol_L_2 domain-containing protein.	RPOLD domain-containing protein.	0.998
LSAT_1X106300	LSAT_9X38740	A0A2J6LMB0	A0A2J6M8T7	RNA_pol_L_2 domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	0.994
LSAT_1X108420	LSAT_1X106300	A0A2J6M3T0	A0A2J6LMB0	Spt4 domain-containing protein.	RNA_pol_L_2 domain-containing protein.	0.987
LSAT_1X108420	LSAT_1X108541	A0A2J6M3T0	A0A2J6M452	Spt4 domain-containing protein.	Transcription elongation factor SPT4 homolog; May regulate transcription elongation by RNA polymerase II. May enhance transcriptional pausing at sites proximal to the promoter, which may in turn facilitate the assembly of an elongation competent RNA polymerase II complex; Belongs to the SPT4 family.	0.540
LSAT_1X108420	LSAT_1X85441	A0A2J6M3T0	A0A2J6LXN5	Spt4 domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	0.961
LSAT_1X108420	LSAT_2X67161	A0A2J6M3T0	A0A2J6KZG9	Spt4 domain-containing protein.	RPOL4c domain-containing protein.	0.987
LSAT_1X108420	LSAT_6X116841	A0A2J6M3T0	A0A2J6L9M9	Spt4 domain-containing protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.986
LSAT_1X108420	LSAT_6X13361	A0A2J6M3T0	A0A2J6LRX8	Spt4 domain-containing protein.	Uncharacterized protein.	0.992
LSAT_1X108420	LSAT_7X114200	A0A2J6M3T0	A0A2J6LN13	Spt4 domain-containing protein.	RPOLD domain-containing protein.	0.972
LSAT_1X108420	LSAT_7X47540	A0A2J6M3T0	A0A2J6KJJ1	Spt4 domain-containing protein.	Uncharacterized protein.	0.714
LSAT_1X108420	LSAT_9X111421	A0A2J6M3T0	A0A2J6LYA8	Spt4 domain-containing protein.	RPOLD domain-containing protein.	0.987
LSAT_1X108420	LSAT_9X38740	A0A2J6M3T0	A0A2J6M8T7	Spt4 domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.	0.961