LSAT_3X53820 protein (Lactuca sativa) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Cooccurrence

Coexpression

Experiments

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Textmining

[Homology]

Score

LSAT_3X53820

Uncharacterized protein. (299 aa)

Predicted Functional Partners:

LSAT_0X32260

0.544

LSAT_3X125540

0.530

LSAT_6X84421

0.484

LSAT_0X3100

0.466

LSAT_4X184881

0.466

LSAT_3X54021

0.460

LSAT_3X82901

0.460

LSAT_5X146160

0.437

LSAT_5X168601

0.433

LSAT_0X37780

0.433

Your Current Organism:

Lactuca sativa

NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LSAT_0X3100	LSAT_0X37780	A0A2J6KP07	A0A2J6JL47	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.989
LSAT_0X3100	LSAT_3X125540	A0A2J6KP07	A0A2J6KQG9	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.999
LSAT_0X3100	LSAT_3X53820	A0A2J6KP07	A0A2J6KL52	Uncharacterized protein.	Uncharacterized protein.	0.466
LSAT_0X3100	LSAT_4X184881	A0A2J6KP07	A0A2J6MDW2	Uncharacterized protein.	Uncharacterized protein.	0.901
LSAT_0X3100	LSAT_5X146160	A0A2J6KP07	A0A2J6JSD9	Uncharacterized protein.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
LSAT_0X3100	LSAT_5X168601	A0A2J6KP07	A0A2J6JHY4	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.989
LSAT_0X32260	LSAT_3X53820	A0A2J6L3T0	A0A2J6KL52	Uncharacterized protein.	Uncharacterized protein.	0.544
LSAT_0X37780	LSAT_0X3100	A0A2J6JL47	A0A2J6KP07	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	Uncharacterized protein.	0.989
LSAT_0X37780	LSAT_3X125540	A0A2J6JL47	A0A2J6KQG9	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	0.997
LSAT_0X37780	LSAT_3X53820	A0A2J6JL47	A0A2J6KL52	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	Uncharacterized protein.	0.433
LSAT_0X37780	LSAT_4X184881	A0A2J6JL47	A0A2J6MDW2	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	Uncharacterized protein.	0.989
LSAT_0X37780	LSAT_5X146160	A0A2J6JL47	A0A2J6JSD9	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.987
LSAT_0X37780	LSAT_5X168601	A0A2J6JL47	A0A2J6JHY4	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.900
LSAT_3X125540	LSAT_0X3100	A0A2J6KQG9	A0A2J6KP07	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.999
LSAT_3X125540	LSAT_0X37780	A0A2J6KQG9	A0A2J6JL47	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.997
LSAT_3X125540	LSAT_3X53820	A0A2J6KQG9	A0A2J6KL52	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.530
LSAT_3X125540	LSAT_4X184881	A0A2J6KQG9	A0A2J6MDW2	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein.	0.999
LSAT_3X125540	LSAT_5X146160	A0A2J6KQG9	A0A2J6JSD9	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.	0.999
LSAT_3X125540	LSAT_5X168601	A0A2J6KQG9	A0A2J6JHY4	Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.	Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.	0.997
LSAT_3X53820	LSAT_0X3100	A0A2J6KL52	A0A2J6KP07	Uncharacterized protein.	Uncharacterized protein.	0.466