STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_1X35840Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. (453 aa)    
Predicted Functional Partners:
LSAT_4X116341
Uncharacterized protein.
    
 0.809
LSAT_5X148460
Uncharacterized protein.
    
 0.719
LSAT_5X33821
RIO domain-containing protein.
    
 0.713
LSAT_2X5041
Bms1-type G domain-containing protein.
    
 0.684
LSAT_6X87181
Uncharacterized protein; Belongs to the NOB1 family.
    
 0.611
LSAT_6X28400
ANK_REP_REGION domain-containing protein.
    
 
 0.573
LSAT_1X28960
Serine/threonine-protein kinase RIO1; Belongs to the protein kinase superfamily. RIO-type Ser/Thr kinase family.
     
 0.511
LSAT_3X125540
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
    
 0.499
LSAT_5X167021
Uncharacterized protein.
   
 
  0.488
LSAT_1X53901
Uncharacterized protein; Belongs to the universal ribosomal protein uS12 family.
    
  0.487
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.