STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LSAT_1X35820Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily. (1212 aa)    
Predicted Functional Partners:
LSAT_1X91820
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.521
LSAT_7X110961
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.521
LSAT_8X161180
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.521
LSAT_7X69161
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.521
LSAT_3X67441
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.521
LSAT_3X16240
ALA-interacting subunit; Belongs to the CDC50/LEM3 family.
   
 0.521
LSAT_1X77700
Tr-type G domain-containing protein.
      
 0.482
Your Current Organism:
Lactuca sativa
NCBI taxonomy Id: 4236
Other names: L. sativa, Lactuca sativa L., cultivated lettuce, garden lettuce
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.